FISSA
FISSA User Guide
Usage Examples
API Reference
Contributing code
Changelog
Credits
Index
C
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D
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E
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F
|
G
|
I
|
L
|
M
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N
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P
|
R
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S
|
T
C
calc_deltaf() (fissa.core.Experiment method)
clear() (fissa.core.Experiment method)
clear_separated() (fissa.core.Experiment method)
D
DataHandlerAbstract (class in fissa.extraction)
DataHandlerPillow (class in fissa.extraction)
DataHandlerTifffile (class in fissa.extraction)
DataHandlerTifffileLazy (class in fissa.extraction)
E
Experiment (class in fissa.core)
extract() (in module fissa.core)
extracttraces() (fissa.extraction.DataHandlerAbstract method)
(fissa.extraction.DataHandlerPillow static method)
(fissa.extraction.DataHandlerTifffile static method)
(fissa.extraction.DataHandlerTifffileLazy static method)
F
find_roi_edge() (in module fissa.roitools)
findBaselineF0() (in module fissa.deltaf)
fissa
module
fissa.core
module
fissa.deltaf
module
fissa.extraction
module
fissa.neuropil
module
fissa.polygons
module
fissa.readimagejrois
module
fissa.roitools
module
G
get_frame_size() (fissa.extraction.DataHandlerAbstract method)
(fissa.extraction.DataHandlerPillow static method)
(fissa.extraction.DataHandlerTifffile static method)
(fissa.extraction.DataHandlerTifffileLazy static method)
get_mask_com() (in module fissa.roitools)
get_npil_mask() (in module fissa.roitools)
getmasks() (in module fissa.roitools)
getmasks_npil() (in module fissa.roitools)
getmean() (fissa.extraction.DataHandlerAbstract method)
(fissa.extraction.DataHandlerPillow static method)
(fissa.extraction.DataHandlerTifffile static method)
(fissa.extraction.DataHandlerTifffileLazy static method)
I
image2array() (fissa.extraction.DataHandlerAbstract method)
(fissa.extraction.DataHandlerPillow static method)
(fissa.extraction.DataHandlerTifffile static method)
(fissa.extraction.DataHandlerTifffileLazy static method)
L
load() (fissa.core.Experiment method)
M
module
fissa
fissa.core
fissa.deltaf
fissa.extraction
fissa.neuropil
fissa.polygons
fissa.readimagejrois
fissa.roitools
N
nCell (fissa.core.Experiment property)
nTrials (fissa.core.Experiment property)
P
parse_roi_file() (in module fissa.readimagejrois)
poly2mask() (in module fissa.polygons)
R
read_imagej_roi_zip() (in module fissa.readimagejrois)
readrois() (in module fissa.roitools)
rois2masks() (fissa.extraction.DataHandlerAbstract class method)
(in module fissa.roitools)
run_fissa() (in module fissa.core)
S
save_prep() (fissa.core.Experiment method)
save_separated() (fissa.core.Experiment method)
save_to_matlab() (fissa.core.Experiment method)
separate() (fissa.core.Experiment method)
(in module fissa.neuropil)
separate_trials() (in module fissa.core)
separation_prep() (fissa.core.Experiment method)
shift_2d_array() (in module fissa.roitools)
split_npil() (in module fissa.roitools)
T
to_matfile() (fissa.core.Experiment method)