Credits#
Development#
Sander Keemink : Conception, Overall development
Scott Lowe : Overall development
Supervision#
Nathalie Rochefort
Mark van Rossum
Testing#
Janelle Pakan
Evelyn Dylda
External Code#
polygons.py was adapted from code contained in the SIMA package under the GNU GPL v2 License.
NIH ImageJ ROI parsing was apapted from code originally written by Luis Pedro Coelho under the MIT license.
Funding#
SK: DTC & Eurospin
Wellcome Trust (Sir Henry Dale Fellowship), EU funding (Career Integration Grant)
JP: EU intra-European Fellowship
Centre for Integrative Physiology, University of Edinburgh
Citation#
If you use FISSA for your research, we would be grateful if you could cite our paper on FISSA in any resulting publications:
S. W. Keemink, S. C. Lowe, J. M. P. Pakan, E. Dylda, M. C. W. van Rossum, and N. L. Rochefort. FISSA: A neuropil decontamination toolbox for calcium imaging signals, Scientific Reports, 8(1):3493, 2018. doi: 10.1038/s41598-018-21640-2.
For your convenience, we provide a copy of this citation in bibtex and RIS format.